#!/bin/bash

set -e
set -v


if [ X${testdir} = "X" ]; then
    testdir=`dirname  $0`
    export testdir
fi

TOPDIR=`pwd`

# generate the input file
input_dir=./input
mkdir $input_dir
echo "This is sample input to KEG" > ./input/f.a

# output directory
# this is the one we put in site catalog
mkdir -p outputs

#create a test output directory
output_dir=./output
mkdir -p $output_dir

# build the dax generator
export CLASSPATH=$testdir:`pegasus-config --classpath`
javac $testdir/BlackDiamondDAX.java

# generate the dax
java BlackDiamondDAX /usr blackdiamond.dax

# create the site catalog
cat >sites.xml <<EOF
<?xml version="1.0" encoding="UTF-8"?>
<sitecatalog xmlns="http://pegasus.isi.edu/schema/sitecatalog" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://pegasus.isi.edu/schema/sitecatalog http://pegasus.isi.edu/schema/sc-3.0.xsd" version="3.0">
    <site  handle="local" arch="x86" os="LINUX">
        <head-fs>
            <scratch>
                <shared>
                    <file-server protocol="file" url="file://" mount-point="$TOPDIR/work"/>
                    <internal-mount-point mount-point="$TOPDIR/work"/>
                </shared>
            </scratch>
            <storage>
                <shared>
                    <file-server protocol="file" url="file://" mount-point="$TOPDIR/outputs"/>
                    <internal-mount-point mount-point="$TOPDIR/outputs"/>
                </shared>
            </storage>
        </head-fs>
        <profile namespace="pegasus" key="clusters.num">1</profile>
    </site>
    <site  handle="condorpool" arch="x86" os="LINUX">
       <head-fs>
            <scratch>
                <shared>
                    <file-server protocol="gsiftp" url="gsiftp://cartman.isi.edu" mount-point="/nfs/ccg4/scratch-purge-no-backups/bamboo/scratch"/>
                    <internal-mount-point mount-point="/nfs/ccg4/scratch-purge-no-backups/bamboo/scratch"/>
                </shared>
            </scratch>
            <storage>
                <shared>
                    <file-server protocol="gsiftp" url="gsiftp://cartman.isi.edu" mount-point="/nfs/ccg4/scratch-purge-no-backups/bamboo/outputs"/>
                    <internal-mount-point mount-point="/nfs/ccg4/scratch-purge-no-backups/bamboo/outputs"/>
                </shared>
            </storage>
        </head-fs>

        <profile namespace="pegasus" key="style" >condor</profile>
        <profile namespace="condor" key="universe" >vanilla</profile>
        <profile namespace="env" key="PEGASUS_HOME" >/usr</profile>
    </site>
</sitecatalog>
EOF

# plan and submit the  workflow
pegasus-plan \
    --conf $testdir/pegasusrc \
    --sites condorpool \
    --dir work \
    --output-site local \
    --input-dir $input_dir \
    --output-dir $output_dir \
    --dax blackdiamond.dax \
    --submit | tee plan.out




